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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832453.1_cds_XP_016504907.1_18296
CDS Infomation

[gene=LOC107822849] [db_xref=GeneID:107822849] [protein=peptide chain release factor APG3, chloroplastic-like] [frame=2] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016504907.1] [location=complement(join(21161..21229,21343..21426,21968..22015,22445..22502,23768..23900,24007..24079,24396..24560,24651..24716,25136..25185,25988..26039,26163..26266,26406..26463,26568..26648,27193..27249,27497..>27554))] [gbkey=CDS]
Sequence

GCTTTCGTTCGAGCTCCGCCGAATCACACCCCTTCTAGAAGAATCGTCTGCATGGCGGAA
CCTTATCTAATTACAAAACTTGATTCAGCTGAGAAAACGTGGAAAGAATTGTCGGTTAAG
CTTGCTGATCCGGATGTTGTCTCAAATCCAAGTGAATATCAGAAGTTGGCGCAGTCAATG
GCAGAGCTAGATGAAGTCGTGTTGACATACAGGAAATTCAAGGATTGTGAGAAGCAACTG
GAAGAAGCAAAAGCTTTATCTAAAGACGCTGGAGCCGACGAGGACATGGCTGAGATGGTA
GCTTCTGAAATTCAATCCTTGACGGAGCAAATCAAAGACCTAGAGGAGAAGTTTAAGCTA
ATGCTCCTTCCAAGTGACCCTCTTGATTCGAGGAATATAATGCTTGAAGTCAGGGCAGGT
GCTGGTGGGGATGAGGCTGGAATTTGGGCTGGTGATCTTGTGCGTATGTATGAGAAGTAC
AGCGAACGGAACTCTTGGAAGTTTGCTCCGATCTCATGCTCCGAGGCTGAAAAAGGAGGA
TTTAAAACATATGTGATGGAGATCAAAGGCAAGCGTGTCTATAGTAAATTAAAATATGAA
TCTGGTGTTCATCGAGTTCAACGTGTACCGCAAACAGAAACTCAAGGCCGTGTTCACACT
TCCACTGCAACAGTTGCTATCATGCCAGAGGCTGATGAAGTTGATGTGGAAATCGATCCA
AAGGATATAGAACTAACAACAGCACGTTCTGGTGGTGCTGGAGGGCAGAATGTTAACAAG
GTGGAGACTGCAGTTGATCTTTACCATAAACCAACGGGAATTAGAATATTTTGTACCGAA
GAAAGGAGTCAGCTTAAAAACAAGAATCGTGCTTTCCAACTACTGAGAGCCAAATTGTAT
GAGATTAAGTTAAGGGAGCAGCAGGAATCGATAAGAAACCAGAGAAAATTACAGGTAGGT
ACTGGTGCTCGGTCAGAAAAAATTCGGACATACAACTACAAGGACAATAGGGTCACTGAT
CATCGGCTAAAAATGAACTTTGAGCTTACCTCATTTCTTGAGGGTGACATTGAGACAGCT
GTTCAGTCTTGTTCTACTATGGAACAACAGGAGTTACTGCAAGAACTTGCGGAATCTGTC
AGTACGCCTGCTTGA

Peptide Sequence

PEP ID

XP_016504907.1
PEP Infomation

PREDICTED: peptide chain release factor APG3, chloroplastic-like [Nicotiana tabacum]
Sequence

MNTLANTGFAAGISATSSIQWPIRRRCFGFSGGGSAFVRAPPNHTPSRRIVCMAEPYLIT
KLDSAEKTWKELSVKLADPDVVSNPSEYQKLAQSMAELDEVVLTYRKFKDCEKQLEEAKA
LSKDAGADEDMAEMVASEIQSLTEQIKDLEEKFKLMLLPSDPLDSRNIMLEVRAGAGGDE
AGIWAGDLVRMYEKYSERNSWKFAPISCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHR
VQRVPQTETQGRVHTSTATVAIMPEADEVDVEIDPKDIELTTARSGGAGGQNVNKVETAV
DLYHKPTGIRIFCTEERSQLKNKNRAFQLLRAKLYEIKLREQQESIRNQRKLQVGTGARS
EKIRTYNYKDNRVTDHRLKMNFELTSFLEGDIETAVQSCSTMEQQELLQELAESVSTPA

Transcript Sequence

Gene sequence data has not been registered.